rs46684548 SNP Detail

Summary

• ID
  rs46684548
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:61075407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATCTTGT TGTCATTTAA
  GTGGACAGGG CCTGAAAAAG CCATAGAAAG ATATATGTTC CAGCCAAAAT GTTGACTTGT
  CATTTGCTTT CCTGAGCCAT GTTTTAGCCT CTGCATTCCA TTCAAAGTGG AGTTTTATTA
  ACACAAAGCA CAGTGGCTTT TTTCCCCCAA CCAGCAGTCA AATTCCTCTC CATCTAAAGA
  R
  TATCTCTCTG GGAATTCATT ACTGTGGTTC TATCAGTCTA GTTTTGATGG TAGACCACAC
  AGCTGGCTCC CTCACTCTTG GAATTACCAA GATCCCATCT AGATCTCCAG TGACACTGAC
  CGCCTGGCTG GGTGTACCAT GAGCTTGCTT CCTAGGCTAG AATCCCAGTT GAGCCCAGGT
  TCTTGGGCTT CTACTATGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146653750	ENSMUSSNP4181993	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46684548					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:61075407 () rs orientation: forward

Symbol	Name	Function Class
Rr557773	regulatory region 557773	1607 bp proximal