rs46688964 SNP Detail

Summary

• ID
  rs46688964
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25518989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAC TTTCTTAAAC CTCCCTATTC
  Y
  ATGGTAGTGA AACTACCTTG TGCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145383721	ENSMUSSNP2841356	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325337073	CHEV_17_25436960	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46688964					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25518989 () rs orientation: forward

Symbol	Name	Function Class
Prss34	serine protease 34	within coordinates
Tssr143150	transcription start site region 143150	1612 bp downstream