rs46694052 SNP Detail

Summary

• ID
  rs46694052
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170785969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAG AGCCAAAAGA TAGCAAACTC
  R
  CCCTTTTAGA AGGAAGCCAC TCCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146148871	ENSMUSSNP3596931	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320114973	CHEV_1_172888531	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46694052					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170785969 () rs orientation: forward

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	217 bp downstream
Gm70986	predicted gene, 70986	84 bp upstream
Tssr284	transcription start site region 284	1494 bp downstream
Tssr14949	transcription start site region 14949	495 bp downstream
Tssr14950	transcription start site region 14950	1339 bp downstream
Tssr14951	transcription start site region 14951	1417 bp downstream
Tssr14952	transcription start site region 14952	1674 bp downstream
Tssr14953	transcription start site region 14953	1689 bp downstream