rs46698269 SNP Detail

Summary

• ID
  rs46698269
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69663669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAA AGAGGAGGGG AATGAAGGAC
  T
  ATAAGAATAT AAATATTCCT ATTTA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss144563476	ENSMUSSNP3234747	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss324404672	CHEV_13_69654428	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs46698269					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69663669 () rs orientation: forward

Symbol	Name	Function Class
Gm48676	predicted gene, 48676	1374 bp downstream
Rr273498	regulatory region 273498	732 bp proximal
Rr277031	regulatory region 277031	469 bp distal
Tent4a	terminal nucleotidyltransferase 4A	within coordinates