rs46702388 SNP Detail

Summary

• ID
  rs46702388
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61008174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTACAGGCTC TTTTCTACAG AGCCATCTCT CCAGCAATGA
  TATTTCTGTG CTTTTAGTAA GTTTTCATCT TCTTCATGCA TCACACTCAG GCCAGTGTGC
  R
  CGAGCACACA CACACACACA CACACACACA CACACACACA CACACACTCC TACCATGTAC
  AAGTTCTATA TAAACATGGC TACCTGGCAT GGTCTCTATC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136537235	ENSMUSSNP3453376	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46702388					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61008174 () rs orientation: forward

Symbol	Name	Function Class
D9Mit72	DNA segment, Chr 9, Massachusetts Institute of Technology 72	1898 bp distal
Gm34004	predicted gene, 34004	within coordinates
Rr196206	regulatory region 196206	827 bp proximal