rs46704978 SNP Detail

Summary

• ID
  rs46704978
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:56683967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGGTTATCT TGAACTCCTA ACATCCCTAA GAATAGGAAC
  CCTGCTGGTT CATTAGAGAA GCATACAGAA CTAAGGGTCT GGACTGTGGT TTACGATAGT
  T
  TGCTGTCAGG AACATTCTGA GACTGGACAA CCCATCAATG ACTACGAACC AAACAGTTGA
  AAGCTTAGAA TCAGAAAGAG AATAAGACAG GCTCAAGCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss144915355	ENSMUSSNP1329594	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46704978					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:56683967 () rs orientation: forward

Symbol	Name	Function Class
Rr663625	regulatory region 663625	1117 bp proximal
Rr663626	regulatory region 663626	1616 bp proximal
Tssr81315	transcription start site region 81315	1770 bp upstream