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rs46707349 SNP Detail
Summary
  • ID
    rs46707349
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr13:36987212 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCCAGCCTAG GGCCCAGTGC
    ACTCCTCGTT CAGGGAAGGT CTTCCACGTT CACTCATAGC TTTGTGTAAA CAGTTATAGA
    CACACCCAGA ACTAACAAGC AAGCTTAATC ATCACAGCAC CCGAGATTTA CGTACACCAG
    GTCTGAGAGA CCTGCAGGTC AGAGCACAAA TGGCACAGAG GAAAACTATG TGCAGCCTGC
    M
    TTGCTTAATG GTAGGACAGA CAGTGTCCTA AGAAATAGAA CACAGGGGAA CTTTTTCATT
    GAGTGCCCAT CATGGGGTGC ATTTACACAA GCCTAGCGTG TCCGGGCTGA TCACTTGACA
    CAGCCTCTGA CGTAGTAAAA GAACAAGATG GGGTTTAAGG AATGATTCAA TGACTAAGAG
    CATGTTGTGC TCTTGCTGAG                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss61769427 NES17696811 PERLEGEN MM_PANEL2 f SNP A A A A A A A A A A A A C A
SNP Consensus Information
SNP Consensus Type
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs46707349 SNP A A A A A A A A A A A A C A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss61769427 NES17696811 PERLEGEN MM_PANEL f SNP A/C

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory