rs46710660 SNP Detail

Summary

• ID
  rs46710660
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65290670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAACAACTG GGTGAGCGCA GGGCACGGCC TCCAGAGGCA
  AATTCCACTG CTGGCATGGG ATAAGAGGAG GCACACTCCA TTAGCTACTG CGGAGAATGT
  R
  CAGAGTGATT TAAGAAAGGA TCCTGGGGCT GGAGGGATGG GTCAGTGGTT AGAGAATACT
  GGCTACTCTT CCAGACCTGC GCTCAATTCC CAAGCACACA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60626196	NES16299290	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs46710660					SNP	A	A	A	G	A	A	G	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60626196	NES16299290	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65290670 () rs orientation: forward

Symbol	Name	Function Class
Gm45345	predicted gene 45345	216 bp upstream
Klhl2	kelch-like 2, Mayven	within coordinates
Rr184974	regulatory region 184974	1653 bp proximal
Rr190180	regulatory region 190180	within coordinates
Tssr81430	transcription start site region 81430	289 bp downstream