rs46712245 SNP Detail

Summary

• ID
  rs46712245
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:74059599 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATG TTTGTCTTAG TTTCTTCCAC
  R
  ATGCTTTTCT TGATGCCCCT CTTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss61647760	NES17599205	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs46712245					SNP	A	A	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61647760	NES17599205	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:74059599 () rs orientation: forward

Symbol	Name	Function Class
Rr257360	regulatory region 257360	1599 bp distal
Rr257361	regulatory region 257361	1002 bp proximal
Rr261259	regulatory region 261259	599 bp distal
Rr264147	regulatory region 264147	1632 bp distal
Syt16	synaptotagmin XVI	within coordinates