rs46720944 SNP Detail

Summary

• ID
  rs46720944
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70837657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTA TGGCTAATAT TAATTTCACC
  Y
  TGTTGTTCAG TACTTTTATA AAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139686299	ENSMUSSNP155662	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46720944					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70837657 () rs orientation: forward

Symbol	Name	Function Class
B930095I24Rik	RIKEN cDNA B930095I24Rik gene	within coordinates
Cpgi6702	CpG island 6702	151 bp distal
Dmtn	dematin actin binding protein	1967 bp downstream
Fhip2b	FHF complex subunit HOOK interacting protein 2B	382 bp upstream
Rr369865	regulatory region 369865	662 bp downstream
Rr494968	regulatory region 494968	393 bp distal
Rr494969	regulatory region 494969	within coordinates
Tssr4471	transcription start site region 4471	648 bp upstream
Tssr129613	transcription start site region 129613	405 bp upstream
Tssr129614	transcription start site region 129614	386 bp upstream
Tssr129615	transcription start site region 129615	330 bp upstream