rs46722003 SNP Detail

Summary

• ID
  rs46722003
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43859474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ACATTCCAGT GTGAATATGG GAGGGCCACA GAAGTACCCA
  CCCCTAAACA CGGAGCTATT GACAGCTGAT GGTTTCTGGG GAGGAAGTCA ATTTTCTTTA
  R
  GGGTGTGGCC TTTCGTATAT TAACAGTAAC GGTGGATGAT GTCACACTCA TGAGTATATG
  AGCAGCAGCA ACTGGACTCA GTGAGCGGTT AAAAGAATAC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147020847	ENSMUSSNP2685260	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46722003					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43859474 () rs orientation: forward

Symbol	Name	Function Class
Rr345822	regulatory region 345822	527 bp proximal
Rr348914	regulatory region 348914	874 bp distal
Rr356243	regulatory region 356243	552 bp proximal
Rr393629	regulatory region 393629	515 bp downstream
Spink1	serine peptidase inhibitor, Kazal type 1	1660 bp downstream