rs46722113 SNP Detail

Summary

• ID
  rs46722113
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90724805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA ACCAAAACCA AACCACAAAA
  R
  CAGCCCAGCA GTGGTGACCC ATGAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146921251	ENSMUSSNP1636517	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320391445	CHEV_2_90734618	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46722113					SNP	G	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90724805 () rs orientation: forward

Symbol	Name	Function Class
Gm32514	predicted gene, 32514	1263 bp upstream
Ndufs3	NADH:ubiquinone oxidoreductase core subunit S3	166 bp downstream
Rr560592	regulatory region 560592	within coordinates
Tssr25138	transcription start site region 25138	880 bp downstream