rs46723317 SNP Detail

Summary

• ID
  rs46723317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019404 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACCTACG AAAAATGGTG
  TAAATCCATC AGCTTGCTTT ACTTTAATAT CTTCTGTAAT GTTCAAAGTG CTGAACAATA
  GCGGCTAGAG GTAGTTCAAA GAACCCTTCC ACAGGGGTCA CATATCAGAC ATCCTGAACA
  TCAGGTATTT ACATTATTAT TCATAACAGT ACCAAAATTA CAGTTATGAG TTAACAAGGA
  R
  GATAATTTTA TGGTTGGGGT CACCAGAACA TGAGGAATTG TAATAAAGTG TTGCAGATAT
  AAGAGGGTTG AGAACCACTT TGCTAGAAAA GAAGTGTTTC CACAGACTTT GATGGAGTCA
  AAAATCAAAT GAAATAATTT CAAGTGCATT TACAAATGTG AATAAAATCC GTAGTTAAGA
  GTCAAGAATG TCTCAATATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135782583	ENSMUSSNP6939205	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320926404	CHEV_3_123928673	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46723317					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019404 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	424 bp proximal