rs46731271 SNP Detail

Summary

• ID
  rs46731271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125222069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGTGTTT TACTTAGCTT
  GTGTTATTTG GCATAAAATG CATCCTGGTG GTCCAAGACT TCATGTTCAG ACTGTATTAA
  AAACAGCAGT TATATTTAAG AATGTGAACT CAGATTGGTT CATTTGTTTC ACGCATCTTT
  TTGGTCAAGC AGAGACCAAC AGTATGACAG TGAAGACTCT ATTCTAAAAA GCAGCCTGAA
  R
  GGCTTCATAG TGGAACATGA AGTCTTTCAA CTGGCAGAGG CTCTGATAAC AAGGCTCTCA
  GCCATCCTGT GTTTGTGGCT TCAGGATGAC AGATGAAGAG AAAAATCTCA TCCCACAGCA
  AGAGAAACAT GACACAAGGA AAAGCAGCAT ATGGTGGCTC CCTTCTCCCC CTCTCCGAAG
  TGTGTTTATT TGAGCTCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147476293	ENSMUSSNP5499758	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46731271					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125222069 () rs orientation: forward

Symbol	Name	Function Class
Fbn1	fibrillin 1	Intron
Rr564209	regulatory region 564209	731 bp distal