rs46736085 SNP Detail

Summary

• ID
  rs46736085
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127272839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATACCACA GCTTCTCTCT
  GAATTATGTC TTATTTAATT TTACATAAAC TCTATAAACT TAAACTGGAT ATTTATAAAC
  ACCGAAAGAA AACTGGTCTT ATCATCTATT TCCAGCAAAT TGTGCATAAT TCTGATTAAG
  GAATTTAGCT TAGGCTTTTG CATGTTGTAA GTTTACTTTT GCAATCGTGG GCAAGGCAGA
  R
  TAGGGGCCAA CTATTGGCCT GGGAACTAGG AAGTGATAGC AAGAGGGAGG AAGAAGCTGG
  GGTCCCATCA TCCTTTGCAA GGGCACAAGC CCTCCTGCTA GGCACTTCTT AAGGTTCCAT
  CATTTTCCTA AAGCACCACA CGGAGGCCAA GTCTTTACCA GATGGTCCTT TGGGGGCAGG
  GCACTTACGA TGCAAACTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135864411	ENSMUSSNP2920781	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320954476	CHEV_3_127182108	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46736085					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127272839 () rs orientation: forward

Symbol	Name	Function Class
Ank2	ankyrin 2, brain	within coordinates
Gm42525	predicted gene 42525	989 bp downstream
Gm43355	predicted gene 43355	245 bp downstream
Gm54939	predicted gene, 54939	1930 bp upstream