rs46746875 SNP Detail

Summary

• ID
  rs46746875
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16403982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGAGTGTT GGTCTGATGA
  TGATACCACT GTAGCTACCT GCTTCAGATA GCTGGTGGTT TCTTTTATAA ATACCTCTAA
  ATTTGGACTG ATTTTTCTTC ATGGTTAAGC TCAAGATACG CAGGCTCATC ACTAACTGCA
  GAAAGGATGC CATACCCTTT CAGTCCAGCA CATGGGGAGC CTCAGGATAT CAGTGCCCCT
  Y
  ATTGGTGACC ATGGCAACTT GGAGAGAGAG AGGTAAGATT CTCAGGACCC ACCGGAAGAA
  TTAGAATTTG TATTTAAGCC ATGACTTTGA TGGGCTGGAG AGACAGCTGA TTAGGGCTTT
  GTGACTTCTA GCTGAAGGAT GTAGCAGGTA GAGGGGGTGG GACAGTGGGG CTATAGCCCA
  TGATAAGGTC TCAAATTAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148392544	ENSMUSSNP3637854	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46746875					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16403982 () rs orientation: forward

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	1274 bp downstream
Rr642728	regulatory region 642728	1071 bp distal