rs46749849 SNP Detail

Summary

• ID
  rs46749849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170785575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGA TAATGATATT TGAACCATTT
  Y
  CAATCATTTG CTCAAGGAAT AACCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146148851	ENSMUSSNP2331801	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss320114969	CHEV_1_172888137	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46749849					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170785575 () rs orientation: forward

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	611 bp downstream
Gm70986	predicted gene, 70986	within coordinates
Tssr284	transcription start site region 284	1888 bp downstream
Tssr14949	transcription start site region 14949	889 bp downstream
Tssr14950	transcription start site region 14950	1733 bp downstream
Tssr14951	transcription start site region 14951	1811 bp downstream