rs46753920 SNP Detail

Summary

• ID
  rs46753920
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134097925 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA AGTGCTATCA CCCGAGTGAG
  A
  GAATGGTATA CAAATGTCTG TTACA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147527429	ENSMUSSNP3567963	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46753920					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134097925 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15037	CpG island 15037	366 bp proximal
Extl1	exostosin-like glycosyltransferase 1	within coordinates
Rr601651	regulatory region 601651	905 bp proximal
Rr601652	regulatory region 601652	1934 bp proximal
Tssr43895	transcription start site region 43895	1000 bp downstream
Tssr43896	transcription start site region 43896	1915 bp downstream
Tssr43897	transcription start site region 43897	1961 bp downstream