rs46756284 SNP Detail

Summary

• ID
  rs46756284
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153778983 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCTCAGTG AGTGCTCAGG
  CCAGTTGGGG CTCGGTCATC ATTTGTGGTT ACACTGGCAA CTGCACTTAT GCTGGGCTCT
  GAGCTGGTCA CCCTCCTGAT TTTCCTGGAG AATTCACATC TCAGATGGGT CCAGGGATGT
  CTGAGTGGTC CAGAGGGGGA GTAAAAGGCA GGTAGATGGC AGGACTGGCA TGTGCAAAGG
  Y
  CCAAAGGCAG GGGGCGTGAC AAGGAGCAGG TGAGAGCATA AGGAGAAGAC GGGGTGGGGG
  TGGAGTCTTG GGTGTCAAGG GAAGCCTGGG TAGAAGACTG GGCAACTGGT GCCTCTATGG
  GAATAGGGAG TGATGGGGGA AAGGAAGGTG GGAACTTTGA GTGAGGGAAT GTTCTATAGT
  GTGGTGAGAT GCAGGCTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148010211	ENSMUSSNP3352309	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320566488	CHEV_2_153762799	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46756284					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153778983 () rs orientation: forward

Symbol	Name	Function Class
Bpifb4	BPI fold containing family B, member 4	1154 bp upstream
Rr567755	regulatory region 567755	1614 bp distal
Rr567756	regulatory region 567756	1368 bp distal
Tssr20927	transcription start site region 20927	1155 bp upstream