rs46762859 SNP Detail

Summary

• ID
  rs46762859
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119229249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAT TTTATTTATT TATTTATTTA
  K
  TTAGTTAGTT GTTGTTTTTT TCGAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss137047073	ENSMUSSNP6911642	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46762859					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119229249 () rs orientation: forward

Symbol	Name	Function Class
Acvr2b	activin receptor IIB	1935 bp upstream
Cpgi22474	CpG island 22474	1419 bp proximal
Gm53515	predicted gene, 53515	142 bp downstream
Gm69683	predicted gene, 69683	within coordinates
Rr688480	regulatory region 688480	1034 bp proximal
Rr688481	regulatory region 688481	1275 bp proximal
Rr688482	regulatory region 688482	1780 bp proximal
Tssr87682	transcription start site region 87682	1898 bp upstream
Tssr87683	transcription start site region 87683	1973 bp upstream