rs46763133 SNP Detail

Summary

• ID
  rs46763133
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:56985474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTA TGTTAAAGTG TGTGTGTGTG
  G
  GGGGGGGCAG AATAGGATGT TAGAT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136516073	ENSMUSSNP4172699	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46763133					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:56985474 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21809	CpG island 21809	665 bp distal
Rr401393	regulatory region 401393	1953 bp downstream
Rr679589	regulatory region 679589	1781 bp distal
Rr679590	regulatory region 679590	1369 bp distal
Rr679591	regulatory region 679591	868 bp distal
Sin3a	transcriptional regulator, SIN3A (yeast)	Intron
Tssr85286	transcription start site region 85286	1803 bp downstream
Tssr85287	transcription start site region 85287	1779 bp downstream