rs46766833 SNP Detail

Summary

• ID
  rs46766833
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82947750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTGGATG ACCTGGAACC
  TACAATGTAG ACAAGGCTGT GCTCATATTT TTGGAAATCT TCTTACCTCT GCCTTCCAAG
  TGTTGGCATT ATAATCATGT ACCAACATAC CTGGCACTTG ACTGTAGAAT TTAGAGAACA
  AGGATTGATA GCTAGCAGAG AACAGGGCAC GGTGACACAT CCCTATAATT CACGGCAGTC
  R
  TGGCAGATCC ACAGAGCCAC CACAAACCAA CCTGATCTAA GCAGAGGCAG CTTGAGGCCT
  GGGAGGACAA CCATTTCGAG CTAAAATGGC AAACAGTAGC CCAGGCATAA CCACATCAGA
  GCCTTAGAGT TTAATCCAAG CTGAGGCTCC CAGCACTGGG GACAAAGTAT CTCCATGAGT
  TCAGGCCAAC TTCATCTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60904297	NES15955679	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46766833					SNP	G	G	G	G	G	G	A	G	G	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60904297	NES15955679	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82947750 () rs orientation: forward

Symbol	Name	Function Class
M1ap	meiosis 1 associated protein	within coordinates
Rr632712	regulatory region 632712	780 bp distal
Rr632713	regulatory region 632713	171 bp proximal
Rr632714	regulatory region 632714	412 bp proximal