rs46770143 SNP Detail

Summary

• ID
  rs46770143
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33150741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGAAGGA TGGAGAGTAA
  GATGGTAGTT GAGCAGACTC CTCATTGATC TTGACATCGT TGAGAGAGAC AAGGCAGACG
  ACTTCTCCTG GTGTTTCTGC TGGTCCTGGT CACTCCTGCT GACTCATGCT GGTTCTGTGG
  AAGCCTGGAT GTTTGTTATG GGTCGTGACA CAATTGCTGA TTCATGTTTG GTATCCTGAC
  M
  CTACCCAAAC AGGACTGCTG GCATCCTGAG GATTGGAGAC TAAACTCACC CCAAGGAACT
  ACTTCTAAAC AGCATACAGC AGAGCCCCAA GGCTTCTTCT GGATCAACCT GCCATTGCTG
  CTTCATGAAT GGTGTTTGGA GTGGATTGAG CTGCTGCTGC TGAGTGTGAC CTGAGCTGCT
  GATATCCTGA CAATGCAGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137582049	ENSMUSSNP1252377	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46770143					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33150741 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	1971 bp upstream
Rr464869	regulatory region 464869	1481 bp proximal
Rr464870	regulatory region 464870	1982 bp proximal