rs46770286 SNP Detail

Summary

• ID
  rs46770286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70346523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTTTGTG CCTTTTAGTA
  ATCTAGGAAC AGAAAGCTAC TTCCTTTCTG TTCGCAGGCT TTCTGGCTGA AGTCAGTGAT
  TCCCTTCATA TTTCTTAGTG AAAGAGAAAA TGCAAAACCA TCTTATTCTT TTTGTTTGTT
  TGTTTGTTTT GAGACAGGGT TTCTCTGTGT AGCCCTGGCT ATTCTGGAAC TCACTCTGTA
  R
  ACCAGGCTGG CCTCAAACTC AGAAATCCGC CTGCCTCCGC CTCCCAAGTG CTGGGATTAA
  AGGCGTGCAT CACCATGACC GGCTTAAGCC ATCTTATTCT TAAAAAAAAA AAAAAAAAAA
  AAAAAAGACT TTCTAGTTAA CACAGTTACT AGATAAGAAG AAAGCATAGG TTCAAGTATT
  TGTAAAGACA AGGAACATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139680809	ENSMUSSNP2110445	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46770286					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70346523 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494842	regulatory region 494842			1642 bp distal
Rr494843	regulatory region 494843			608 bp proximal
Rr494844	regulatory region 494844			1897 bp proximal
Rr494845	regulatory region 494845			1991 bp proximal