rs46770948 SNP Detail

Summary

• ID
  rs46770948
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67055189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG TTCTAGTTCC GTTGCCTTCT
  C
  CCCTTTTCTT CTGTTTCTGA TGCAG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss149258993	ENSMUSSNP774818	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss324388724	CHEV_13_67008061	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs46770948					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67055189 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5796	CpG island 5796	1752 bp distal
Mterf3	mitochondrial transcription termination factor 3	within coordinates
Ramacl	RNA guanine-7 methyltransferase activating subunit like	within coordinates
Rr273407	regulatory region 273407	412 bp proximal
Rr281575	regulatory region 281575	988 bp distal
Rr369737	regulatory region 369737	1693 bp downstream
Tssr123084	transcription start site region 123084	1755 bp upstream
Uqcrb	ubiquinol-cytochrome c reductase binding protein	1747 bp upstream