rs46771965 SNP Detail

Summary

• ID
  rs46771965
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:22435061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGTGATT ATGTCATGGC
  TGTCTGCTTC ATCCAGTAGA TGAACGCTAA GTCAGGAGAT ATGACCCTTT AAAAGTCTAG
  GACTGTGGCT TTGAAATCTA GATGCATGTT AGAGTCAACT GGGAAATTCC TATATGTGCC
  AAAACCTGGT TTCAAGATCT GTTAACCCAT CAGGATGCTC AGCAAAAATT ATATTGGAGA
  R
  TTTCCTAATT TATTAAAATA TAAGCTGTGT GAGGTAACGA CCATTTTTCT GCCTTCTGGT
  TATGTTCCTA GAAAAGAGGG CTACCTTGAG AAGTAACTGG TCTTGTTGGG CAATTATTGA
  AAATAAAAGC CCACAACTAT GGCAAGCCTG AAGTTGCTAT GTGTGCAGCA GACAACATCT
  ATTGTTTAAG GGGCCAGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63684872	NES17069350	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46771965					SNP	A	A	A	A	G	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63684872	NES17069350	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:22435061 () rs orientation: forward

Symbol	Name	Function Class
Dgkg	diacylglycerol kinase, gamma	within coordinates
Rr513287	regulatory region 513287	1994 bp distal
Tssr4816	transcription start site region 4816	1684 bp downstream