rs46772471 SNP Detail

Summary

• ID
  rs46772471
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:37133123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCC TTGGGTACTT TCTCTAGCTC
  Y
  TCCATTGGGG GCCCTGTGAT CCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324925273	CHEV_15_37062634	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46772471					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:37133123 () rs orientation: forward

Symbol	Name	Function Class
Gm41301	predicted gene, 41301	344 bp downstream
Gm41302	predicted gene, 41302	within coordinates
Gm63629	predicted gene, 63629	1101 bp downstream
Rr714	regulatory region 714	1484 bp proximal
Rr302626	regulatory region 302626	878 bp proximal