rs46774328 SNP Detail

Summary

• ID
  rs46774328
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122295374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACC TTGTTAGTCA GACTAACAGG
  Y
  GTCAGTGAGC ACCCGTGCTC TGTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147010222	ENSMUSSNP7222885	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss324857811	CHEV_14_122457184	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46774328					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122295374 () rs orientation: forward

Symbol	Name	Function Class
Gm63354	predicted gene, 63354	within coordinates
Gm63496	predicted gene, 63496	685 bp downstream
Rr498317	regulatory region 498317	within coordinates
Rr498318	regulatory region 498318	92 bp proximal
Tssr127312	transcription start site region 127312	376 bp upstream
Tssr130315	transcription start site region 130315	100 bp downstream