rs46774745 SNP Detail

Summary

• ID
  rs46774745
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153780214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTAGAGAA AATCTGAATT
  CCGGTCTTAT AATTCTAGTC AGTCATAATT ACCTGGCCCT TCCCAGTCCG GGTCCCCACT
  CAGACTGTGG CCACTTTATA AAGCTGATCT GTGACCAGAC TCAGCCCACA GCAGAGGCCT
  GGGCAACAGA CCTCTGAGGA TTCACTTGCA CACCCCCTCA AGGGTAAGGA GGAGTCCCAT
  Y
  CCTGTCACAG GCCCAGGCTG GTAGGGGAGG CTGAGAAATG AGAAACCCCA CCCTGCAGGC
  TGTAGGGGAG CTCTGCCAGG AGTCAGGACC TCAGATAGCA ATAGGCCCAA ATCAGGACAC
  ACATATGTAT GAAAAAGCTG TGCCCAGCTT TCCCAGGGGT GTGGGCCTTC CGGGATTTTT
  ATTACCTCCG CGATGCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss148010317	ENSMUSSNP6711157	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320566510	CHEV_2_153764030	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46774745					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153780214 () rs orientation: forward

Symbol	Name	Function Class
Bpifb4	BPI fold containing family B, member 4	within coordinates
Tssr20927	transcription start site region 20927	71 bp downstream