rs46776962 SNP Detail

Summary

• ID
  rs46776962
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52314206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCTTCCA AAGGTTCAGA
  GTTCAAATCC CAGCAACCAC ATGGTGGCTC ACAACCATCT GTAACAAGAC CTGACTCCCT
  CTTCTGGAGT GTCTGAAGAC AGCTACAGTG TTCTTACATA TAATAAATAA AATCTTTAAA
  AGAGTGGTGG TGCATGCCTT TAATCCCAGC ACTCCCAGGC AGAGGCAGAT TTCTGAGTTT
  S
  AGGCCAGCCT GGTCTACAAA GTGAGTTCCA GGACAGCCAG AGCTACACAG AGAAAACCTG
  TCTCCAAAAA CAAACAAACA AATGAACGAA CAGTGTTGAT GTGTCCCTGC CTCCCTAATG
  GAGGGATGAA AGCCATTACT ACTCTGGATC CACCTCCACA TTTTTGAGAA AGGATCTTTC
  AGTGAAATGG GTGGGAGCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139500717	ENSMUSSNP5816455	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
ss324627154	CHEV_14_52696424	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46776962					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52314206 () rs orientation: forward

Symbol	Name	Function Class
Hnrnpc	heterogeneous nuclear ribonucleoprotein C	within coordinates
Tssr128488	transcription start site region 128488	1281 bp downstream