rs46780095 SNP Detail

Summary

• ID
  rs46780095
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:79705523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTG TGTTTTATCT TAGTTTCCTT
  Y
  AGTTTTGACG TGAGGCCTTG CCGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss61024674	NES16101781	PERLEGEN	MM_PANEL2	f	SNP				C	T
ss145137868	ENSMUSSNP1157713	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss322280099	CHEV_7_87200661	CHEVERUD	SCREENING_POP	f	SNP			T			T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs46780095					SNP	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61024674	NES16101781	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79705523 () rs orientation: forward

Symbol	Name	Function Class
Rr649770	regulatory region 649770	within coordinates
Tssr73200	transcription start site region 73200	407 bp downstream
Zfp710	zinc finger protein 710	Intron