rs46781039 SNP Detail

Summary

• ID
  rs46781039
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:124506348 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T GAGCCACCAT GTGGTTGCTG GGATTTGAAC TCAGGACCTT
  CAGAAGATCA GTCAGTGCTC TTACCTACGG AGCCATCTCG CCAGCCTTTG TCTGTTTTTC
  G
  AGACAGGGTT TCTCACTGTA GCCCTGGCTG TCCTGGAACT CACTCTGTAG ACCAGGCTGG
  CCTCGAACTC AGAAATCCGC CTGCCTTGCC TCCCAAGGGC T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss149099572	ENSMUSSNP1482829	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs46781039					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:124506348 () rs orientation: reverse

Symbol	Name	Function Class
3100002H09Rik	RIKEN cDNA 3100002H09 gene	1752 bp upstream
Gm2164	predicted gene 2164	within coordinates