rs46784104 SNP Detail

Summary

• ID
  rs46784104
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:12485292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAAATGAA TACTTAAAGA
  AATAGTCCCA TATAAATAAT GCACTATTAG TCTAAGTTTT TGAAGTTAGC AAGAATTGCC
  ATAGCTACAA ATCATTTCAA AACTGACAGC AATGTTTCAT GAATTTAATG TGTTGATAAT
  TTGGCAAGGA GCCTATGAAC AACATAAAAC AGAAGAATAA AGCAGGGTTG CTTACTTTCC
  M
  AAAATTAGGA TAAAAATATG TATATTATGT ATGCTACACA TTTTATAGAC TTTCTGACTG
  ACTTCATACA CATTAACATT TCTTCAAAAT TATAATTGGG TTCTGTAACA TCCATATGCA
  CTTGCCGAAT ATGAGTATAT GCTTGGCCTT CTGTGTTGAT GGCACAAGTG GAAGTTTAAC
  GAATGTGAAT TGAAAATATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146299330	ENSMUSSNP5753257	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46784104					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:12485292 () rs orientation: forward

Symbol	Name	Function Class
Rr551920	regulatory region 551920	450 bp proximal