rs46786375 SNP Detail

Summary

• ID
  rs46786375
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:7162904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCTGCTGCA GAGCATAGGA
  TGGCGCCTAT GGGGCCCGAA CCGGGCTCAA ACCTTTTTGC AGCTCCTGGT GACACTGAGC
  AGTTTTGAAC TTTAGGTTTC ACAGTTTCAA AGACACCAGT GCTCTTAATT TCATCTCGTT
  AGTTTTTGGA TAAATTGGGA CACAATCCTG CGTTGCCAAT TAGCCCGTGC AAATGATAGG
  M
  TGTTTCAAGA CAGGTACTGT TTCCAACAGC GTGGCTGCCT GCAAATACCT TCATGGTCCG
  GATCCAACCC GGGATTCCTA CACTCAAGCT TCCCTGGGAT AGACGCGCTC CTTCCCAATT
  TATGAGGAAT GAAAACCCAG GTCAACAGCT GGGTTACACA GACCTAAACC TGGGTATCCC
  CGCTCAGCGA GGAGACTCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss131649926	ENSMUSSNP2769185	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46786375					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:7162904 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2571	CpG island 2571	140 bp proximal
Igfbp3	insulin-like growth factor binding protein 3	Intron
Rr442458	regulatory region 442458	1233 bp distal
Rr442460	regulatory region 442460	within coordinates
Rr442461	regulatory region 442461	983 bp proximal
Tssr106776	transcription start site region 106776	510 bp downstream
Tssr106777	transcription start site region 106777	536 bp downstream
Tssr106778	transcription start site region 106778	631 bp downstream
Tssr106779	transcription start site region 106779	912 bp downstream
Tssr106780	transcription start site region 106780	946 bp downstream
Tssr106781	transcription start site region 106781	1011 bp downstream
Tssr106782	transcription start site region 106782	1039 bp downstream
Tssr106783	transcription start site region 106783	1265 bp downstream