rs46790997 SNP Detail

Summary

• ID
  rs46790997
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132648326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCAGGGAT CATACAGAGG
  GCAATCAAAC TGAGCCCAGG CACAAGAGTA GACTAGGAGG TCTGACAGTG GAGCAGTCTT
  TACTCCTGGC TTCTCACCAG CCTGCCTGAG AATTTCTCCA AGTATCGCTG TAGGCTGGTC
  TCCTCTTTTG CAAGCACTCA CCTAGCTCAT CCTGTTTCCT CTCGCTCTTT AGTCTATGTA
  Y
  GTGGCAGCAC AGGACAGGGT CACTTCATAT TCAGTTACCA CCTCTACAGA TGGCAAGGTC
  TTGAGGGTAG CATAACTAGG TATTTGCATT TTAAATACCT CTGGACTAGA GTTACAGAAT
  GTGTATCTGA TATGAAAAGC AGGCCAGAAA GCCAGGTAGC CAGGATATTT TTCTAAGTGA
  CAGGCAGACA TTTCCACCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147622804	ENSMUSSNP4115217	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46790997					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132648326 () rs orientation: forward

Symbol	Name	Function Class
Trmt6	tRNA methyltransferase 6	within coordinates