rs46796582 SNP Detail

Summary

• ID
  rs46796582
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:9849908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGGAAGGA GGGTTCTCAA
  GTTCAAAGTC AGCCTGGGCT ACAGAGCAAG ACCCTTCTCA AAGGAAAAAG AACAAGCGTT
  CAGATGCTTG TAATCCCAGC AGTAAAGAGG CAAAGACAGG AAAGTCAGGA GTTCAATGTG
  AGTTCCCAGA TGGAACCGGA GTGACTAGCA TAGAAAATGA GTTTTGCTGT CATCCAGGGT
  G
  TCTGTGGCTT GGATTCAAAT CTATTCCTAA CAATAAACTT CCATCCTAGG TTTGAAGGTA
  CAAGAACAAC TAGCTGCTAT GCTCCTCTAT CTGGGGCATA CAAAGATGGC TAAATAGATG
  TTCAACTTTT AGTAGCTCAA CCTAAAAGAT TTTAAAGCCT TAAAGCCTCT GAAGTTGGGG
  AACAAGTAAT CAATCTTGAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146600571	ENSMUSSNP331595	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46796582					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:9849908 () rs orientation: forward

Symbol	Name	Function Class
Colec12	collectin sub-family member 12	within coordinates
Rr352540	regulatory region 352540	1106 bp distal
Tssr150016	transcription start site region 150016	1168 bp downstream