rs46797190 SNP Detail

Summary

• ID
  rs46797190
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:24793199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA ACCAGGAGCC CCGATTGCCC
  K
  TGCCTTGTGA CATACTTGGC ATGGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146998930	ENSMUSSNP4205091	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss323275276	CHEV_10_24637107	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46797190					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24793199 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	Intron
Tssr92746	transcription start site region 92746	1664 bp downstream
Tssr92747	transcription start site region 92747	1574 bp downstream
Tssr97085	transcription start site region 97085	1808 bp upstream
Tssr97086	transcription start site region 97086	1746 bp upstream
Tssr97087	transcription start site region 97087	1720 bp upstream
Tssr97088	transcription start site region 97088	1660 bp upstream
Tssr97089	transcription start site region 97089	1645 bp upstream
Tssr97090	transcription start site region 97090	1614 bp upstream
Tssr97091	transcription start site region 97091	1219 bp upstream
Tssr97092	transcription start site region 97092	1200 bp upstream
Tssr97093	transcription start site region 97093	1173 bp upstream
Tssr97094	transcription start site region 97094	1162 bp upstream
Tssr97095	transcription start site region 97095	1145 bp upstream
Tssr97096	transcription start site region 97096	860 bp upstream
Tssr97097	transcription start site region 97097	613 bp upstream
Tssr97098	transcription start site region 97098	454 bp upstream
Tssr97099	transcription start site region 97099	646 bp downstream
Tssr97100	transcription start site region 97100	684 bp downstream