rs46798544 SNP Detail

Summary

• ID
  rs46798544
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:9150315 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGCTCTTCCG CACTTTCATT CCTCACGAGT GTGCTCGAGT
  ACTTAACATC GAACATCCTC GAACTGGCTG GTGAGGTGGC CCACACCACT GGCAGGAAGC
  R
  CGTAACTCCA GAGGATGTAC GTCTGGTGGT ACAGAACAAC GAACAGCTCC GCCAACTCTT
  CAAACCAGGT GGCACATCAG TGAATGAGGA TGACAACTGA T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss134085432	ENSMUSSNP4728549	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46798544					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:9150315 () rs orientation: forward

Symbol	Name	Function Class
H2al1m	H2A histone family member L1M	within coordinates
Xk	X-linked Kx blood group	within coordinates