rs46805308 SNP Detail

Summary

• ID
  rs46805308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74794146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATGTTAAG AGAGGCGCAG GGATGTGCAG GCGGAAACCT
  CAAACCAATT CCGCTTGATG GCAGTAGAGC ACCGCGAATG GCAACTGCCA GGCTGCTGGG
  Y
  GCTCTCCCTC CGCCCTTCCA GAGGCAAAAA ACGCCAACCT ACAACCACCA GCCACAAACA
  TGGAGCCTGA GCACTAGGCC TTCCACTGGG CAAAATGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss134210064	ENSMUSSNP4124806	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46805308					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74794146 () rs orientation: forward

Symbol	Name	Function Class
4933407K13Rik	RIKEN cDNA 4933407K13 gene	within coordinates
Rr4695	regulatory region 4695	546 bp distal
Rr4696	regulatory region 4696	within coordinates
Rr8773	regulatory region 8773	1145 bp distal
Rr8774	regulatory region 8774	145 bp distal