rs46805658 SNP Detail

Summary

• ID
  rs46805658
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:113811102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGCCTTC TTCCCCCTCT
  CTTTTTTATT TATAATGACC AGGAATGTTA TTCTGATATA CCTCATCATA CCCAGCCTCT
  GCAATTGTTT AGAGAAGTGT TATAAAATTT AACATAATAA CTATTATTAG AATAAATCAT
  TCTGAATGAT ACCTCTTTTG CCATATAAAA TAGCAAAACA GTGGGAATAA TACTGATGGT
  R
  TCCCTTTAAA ATTCTTCCTG CCATAGACAG GTAGTATTCT GCCATCCAAG GATTACATAA
  TCTTTCCACA TGCAAAATGT TTTAAGTTTT CCTGAGGCTC ATCCCATTGC AGTTTTAGTT
  ACAAGTAAAT GATTTCAACT ATATCCACAG AGATTAAAAT CATACAAACT TATCGTCTTA
  ATAATCTAAG TAAAATGCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146910278	ENSMUSSNP417898	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46805658					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:113811102 () rs orientation: forward

Symbol	Name	Function Class
Tssr4518	transcription start site region 4518	857 bp upstream