rs46807416 SNP Detail

Summary

• ID
  rs46807416
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81933752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGT TACTTTTGAT GCAGGGAAGA
  R
  AAATCTCAAG CTTTCTTTGC CTCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss133338060	ENSMUSSNP7188222	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A		G
ss321840573	CHEV_6_81906765	CHEVERUD	SCREENING_POP	f	SNP				G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs46807416					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81933752 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	1080 bp downstream
Rr632566	regulatory region 632566	165 bp distal