rs46808234 SNP Detail

Summary

• ID
  rs46808234
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140546183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTTGAAC CCAGGTGGGA
  CCCATGCATC TCTCCCAAAG TCCAGCCTAG GGGCCCCACT GGTATCCAGG GCAACTCCCT
  GGCTCCTTGG GTCCCCTCCT TGCCCCAAGG CAGCTGTAGG AACACACCCA GGAATGGTGA
  AGGAAGGACA GGATCCCCAT GAGGTGACAG GTGACACAGC TTTGGGTACT CACCATCAAA
  C
  TGCTCAGCCT CCCCGTAGCC CTCCTCCTTC TTCTCCTGGA ACAGCTGGAG GCAGGCACTG
  GGGCTGGCCA GGAGGAGGCG GAAGCCCTGC CATAGAGGGG ACAAAGGGCT CAAGGCATGG
  ATCCAAGGAC AGTTCAGGAG CCCACCCACC ACGCCCGTGT TTCCCACCTG CAGGCCTTTC
  CCCACACTGG TCTCCCGACC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147714224	ENSMUSSNP5193615	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46808234					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140546183 () rs orientation: forward

Symbol	Name	Function Class
Gm13032	predicted gene 13032	1361 bp downstream
Padi1	peptidyl arginine deiminase, type I	Coding-Synonymous
Rr603557	regulatory region 603557	1778 bp distal
Rr603558	regulatory region 603558	1276 bp distal