rs46808313 SNP Detail

Summary

• ID
  rs46808313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103754143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGT ATCCCCAGAC ACATCACACC
  R
  GGGTACTCAC CCAGAAACGT AGCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135564769	ENSMUSSNP1928109	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss320858680	CHEV_3_103650750	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46808313					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103754143 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l15	BCLl2-like 15	within coordinates
Tssr31007	transcription start site region 31007	9 bp downstream
Tssr31008	transcription start site region 31008	8 bp upstream
Tssr31009	transcription start site region 31009	30 bp upstream
Tssr31010	transcription start site region 31010	67 bp upstream