rs46811448 SNP Detail

Summary

• ID
  rs46811448
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94004423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CATGGAAACC AGTCTTCCAC TAGCAGCCTT CAGATGAAGA
  TGTACAACTC TCAGCTCTTC CTGCCCCATG ACTGCATGAA AGCTGCCATG TTCCTGCCTT
  R
  ATGTTAATGA ACTGATCCTC TGAACCTGTA AGTCAGCCCT AATTAAATGT TGTCCTTTAT
  AAGACTTGCC TTGGTCATAG TGTTTGTGCA CAGCAGTAAC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145521236	ENSMUSSNP5250846	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46811448					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94004423 () rs orientation: forward

Symbol	Name	Function Class
Magi1	membrane associated guanylate kinase, WW and PDZ domain containing 1	within coordinates
Rr151047	regulatory region 151047	1824 bp distal
Tssr62166	transcription start site region 62166	1394 bp downstream