rs46814703 SNP Detail

Summary

• ID
  rs46814703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72215611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTAAGTTTC TGTTTTGAAC
  TCCACATCTT TGTGTTAAAA TATTTGTATA TTTTAACATG GACTCCTGTT TTTTGTGAGG
  CAGTTTTACT TAAAATCTTC ATTAAACCAC CTTGTATTCT TTTTCCTATG GAACCAACCT
  TTAAAATGCT TTAAAACATC AGTGAATTAG AGAAGGTATT AGATACTATA AACATTGTTA
  R
  TAAATAATTT CTATGGCCAC TCGTATAAAA AAAAGTGTAT GGTTATAGTT GAATTCTTAA
  TTAGATTAGT GTCTTTATAG TTCAGTAAGT GATTTCAGTA TATAGTGAAG TATGGTTTCA
  TGGTGCTATA AAGTGGCCGT AATAAAGAAG TACTCGTTAG ATTAGTGACA TGACTGAGCA
  GGCAAAGCCA CTTGGTTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61419713	NES16806290	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46814703					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61419713	NES16806290	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72215611 () rs orientation: forward

Symbol	Name	Function Class
Tssr85978	transcription start site region 85978	1650 bp downstream
Zfp280d	zinc finger protein 280D	within coordinates