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rs46818902 SNP Detail
Summary
  • ID
    rs46818902
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr12:71367944 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TGTGCCTCTC TCTTCCTCAT
    TGAACATCAC AACGGGCCTG AGAGAGTCTA CATGATAACC TTTAACCGGT TTGCTTGCTT
    GTTTGTTTTT AAATGTATGT GTTTGAATGT TTTGCCTGCA TTTGTGTCTA TGCATTCTGT
    GCATGCCTGG TGCCCTCAGA GGCCAGAAGA GGATGTCAGG CCACCTGCTA TTGTTGTAAA
    Y
    AAGAGTTCTT TAGAATATTT CCTTATTTTA AAAAGTTGTG CTCATTATAA AAACAGAACT
    AGCCAAATAA TACTTAAATA ATGACAAAAA CAAACTTCTT CAATTCTTTC TCAATCCTGC
    ACTTGGGGGA TGTGTATCTC CATAAAAACT GTTATATGCA ATGTACATAT ACTAATACCC
    TTGGCCCTTT TTCATGAAAA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss52444351 NES15422775 PERLEGEN MM_PANEL2 f SNP C C C C C C T C C C C C C C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs46818902 SNP C C C C C C T C C C C C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss52444351 NES15422775 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:71367944 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
4930474H06Rik RIKEN cDNA 4930474H06 gene within coordinates
Dact1 dishevelled-binding antagonist of beta-catenin 1 1063 bp downstream
Rr267972 regulatory region 267972 1257 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory