rs46825468 SNP Detail

Summary

• ID
  rs46825468
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:40505272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCATGGGC TTTTCCACAT
  GTCTTGGAGC CTCGGTTTAT ATCTGTAGAA TAAGGAGGAT ACGTCTCATT TCACAAGAGA
  ATGGTGTTAC GTGGTGATAC AGTCATGGCT AAAGCGAAAT CTCTTATTAG TATATTAACG
  TGGTTAATAT TATTCTATTA AATATTATCT GGGCTGGAGA AATGGCTCAG CGATTAACAC
  R
  TGTAATTGCC AGCACCTTCA TCAGGTGGCG CACCACCACC TATAACTCCA GCTCCAGGAC
  ATCTGGTGCC CTCTTCTGGC CTCCATGGGC ACTGCGTGCA TGTGAGAACA ACATGCAATA
  GACCACAGAC CAACAGACCA CAGCAATTTA AATGTAAAAC AAATCTTTAA GATATATTAT
  AGCTATTGTG ATACAACCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147067340	ENSMUSSNP1083853	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46825468					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:40505272 () rs orientation: forward

Symbol	Name	Function Class
Ddo	D-aspartate oxidase	735 bp upstream
Tssr93026	transcription start site region 93026	711 bp upstream
Tssr93027	transcription start site region 93027	781 bp upstream