rs46826982 SNP Detail

Summary

• ID
  rs46826982
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121710055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAGAGGGC CAAAGACAAG CTGACTTTTA AAAGATTTAT
  TTATTTTTAT TTTATGTGTG TATATCTTGT CTGCATCTAT GTATGTGCAC CGCATGTGTG
  Y
  CTTTCTAGTC CTCAAAGGAG GAAGTAGAAT TCTAGAGGTT TGTGAACCCA CCATCAACCA
  GCTGTGGTCT CCCTGCTTGA GCATGAATAG CCAAGGGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
ss135731758	ENSMUSSNP1184849	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320906988	CHEV_3_121619324	CHEVERUD	SCREENING_POP	f	SNP			C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
rs46826982					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121710055 () rs orientation: forward

Symbol	Name	Function Class
Gm34119	predicted gene, 34119	within coordinates
Rr584204	regulatory region 584204	843 bp distal
Rr584205	regulatory region 584205	427 bp proximal