rs46828182 SNP Detail

Summary

• ID
  rs46828182
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:113810724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATCCTTAA AGTATTGCAA
  TGGTGTGAAT TCCATCAGAT CAAGTAGTTT ATACACATAG TTTTCAATTT CTGAGCAAGA
  AACTAACACG AACGCGATGG TTTAAAGCAA TGGTTTAAAG CAACATCTCT TTGTTTTCAA
  AAAGTTGTTT AGGTAAGAAA TCTAGTGGTC TTAGCAGGTG GTTTGCTTAC ATCCTCAAAA
  K
  TTAAGGTCAA GATGTGAACC AGGGTTGGGC TCTTATCTGA GTACTTAAGG GAGGAATTGT
  TTTCTAAGCT CTTCTTTATT GCTTGTGTGC GTATTTTCTT TGAAATTCTG ACACTACGAT
  TCTCGTGCCC TTGTTGTCTA TCACTGTACG CATCCTCTCT GTAGGAAGAG GTAGTTTTCC
  TGCCTTCTTC CCCCTCTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146910258	ENSMUSSNP4503965	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46828182					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:113810724 () rs orientation: forward

Symbol	Name	Function Class
Tssr4518	transcription start site region 4518	1235 bp upstream