rs46831480 SNP Detail

Summary

• ID
  rs46831480
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:85849114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTATACCAA AAAAGATGAG GTAAAAAATG GATTTCATAA
  TACCACTTTA ATGCAATTAT ATGTGATACA ATGTAAAGGC TGTGAAATTG GTTAATTTGG
  K
  TTTGTTGTTC TCTAAAGGAA AAAGAAACTG ATGCTAATAC AGTTGGAGAG TGAAAGCAGG
  AAGACATTTG CATCTTTTAG GGGGACTCTT ACTTTGTTCA                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	PWD/PhJ
ss60244875	NES15748745	PERLEGEN	MM_PANEL2	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	PWD/PhJ
rs46831480					SNP	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60244875	NES15748745	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:85849114 () rs orientation: forward

Symbol	Name	Function Class
1700007H22Rik	RIKEN cDNA 1700007H22 gene	897 bp downstream